Index

_

__str__() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method)

A

active_dose_change() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) add_child() (pytrip.vdx.Contour method) add_contour() (pytrip.vdx.Slice method) add_dicom_contour() (pytrip.vdx.Slice method) add_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) add_field() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) add_log_listener() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

add_plan() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) add_slice() (pytrip.vdx.Voi method) (pytrip.Voi method) add_voi() (pytrip.tripexecuter.TripPlan method) (pytrip.VdxCube method) (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.voicollection.VoiCollection method) (pytrip.vdx.VdxCube method) analyse_cube() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) angles_from_trip() (in module pytrip.res.point) angles_to_trip() (in module pytrip.res.point) array_to_point_array() (in module pytrip.res.point)

C

calculate_angle_quality() (pytrip.paths.DensityProjections method) calculate_angle_quality_thread() (pytrip.paths.DensityProjections method) calculate_back_start_voi() (pytrip.paths.DensityProjections method) calculate_bad_angles() (pytrip.vdx.Voi method) (pytrip.Voi method) calculate_best_angles() (pytrip.paths.DensityProjections method) calculate_center() (pytrip.vdx.Contour method) (pytrip.Voi method) (pytrip.vdx.Slice method) (pytrip.vdx.Voi method) calculate_cube() (pytrip.DensityCube method) (pytrip.paths.DensityCube method) calculate_dvh() (pytrip.dos.DosCube method) (pytrip.DosCube method) (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.dosecube.DoseCube method) calculate_front_start_voi() (pytrip.paths.DensityProjections method) calculate_lvh() (pytrip.let.LETCube method) (pytrip.LETCube method) calculate_projection() (pytrip.paths.DensityProjections method) calculate_quality_grid() (pytrip.paths.DensityProjections method) calculate_quality_list() (pytrip.paths.DensityProjections method) calculate_rest_dose() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) calculate_total_energy() (pytrip.raster.Rst method) (pytrip.Rst method) check_compatibility() (pytrip.cube.Cube static method) clean_cache() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) clean_up() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) cmp_sort() (in module pytrip.paths) compare_dicom_key() (in module pytrip.dicomhelper) compare_raster_point() (in module pytrip.field) compress_files() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) concat() (pytrip.vdx.Contour method) concat_contour() (pytrip.vdx.Slice method) (pytrip.VdxCube method) (pytrip.Voi method) (pytrip.vdx.VdxCube method) (pytrip.vdx.Voi method) concat_to_3d_polygon() (pytrip.vdx.Voi method) (pytrip.Voi method) contains_contour() (pytrip.vdx.Contour method) Contour (class in pytrip.vdx) convert_files_to_voxelplan() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) copy() (pytrip.tripexecuter.Voi method) (pytrip.tripexecuter.voi.Voi method) copy_back_from_server() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

copy_files_to_server() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) coronal (pytrip.vdx.Voi attribute) (pytrip.Voi attribute) create_copy() (pytrip.vdx.Voi method) (pytrip.Voi method) create_cube() (in module pytrip.vdx) create_cube_from_equation() (pytrip.cube.Cube method) create_cylinder() (in module pytrip.vdx) create_dicom() (pytrip.ctx.CtxCube method) (pytrip.CtxCube method) (pytrip.DosCube method) (pytrip.VdxCube method) (pytrip.dos.DosCube method) (pytrip.vdx.VdxCube method) create_dicom_base() (pytrip.cube.Cube method) create_dicom_contour_data() (pytrip.vdx.Voi method) (pytrip.Voi method) create_dicom_contours() (pytrip.vdx.Slice method) create_dicom_label() (pytrip.vdx.Voi method) (pytrip.Voi method) create_dicom_plan() (pytrip.dos.DosCube method) (pytrip.DosCube method) create_dicom_structure_roi() (pytrip.vdx.Voi method) (pytrip.Voi method) create_empty_cube() (pytrip.cube.Cube method) create_exec_field() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_header() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_load_data_files() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_oar() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_opt() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_output() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_exec_plan() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_point_tree() (pytrip.vdx.Voi method) (pytrip.Voi method) create_sphere() (in module pytrip.vdx) create_trip_exec_mult_proj() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_trip_exec_simple() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) create_voi_from_cube() (in module pytrip.vdx) CTImages (class in pytrip) (class in pytrip.ctimage) CtxCube (class in pytrip) (class in pytrip.ctx) Cube (class in pytrip.cube) cube_in_other_cube() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

D

data_file_extension (pytrip.ctx.CtxCube attribute) (pytrip.CtxCube attribute) (pytrip.DosCube attribute) (pytrip.LETCube attribute) (pytrip.dos.DosCube attribute) (pytrip.let.LETCube attribute) DDD (class in pytrip.ddd) decompress_data() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) define_colors() (pytrip.vdx.Voi method) (pytrip.Voi method) delete_plan() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) delete_plan_by_id() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) delete_voi() (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.voicollection.VoiCollection method)

delete_workspace() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) DensityCube (class in pytrip) (class in pytrip.paths) DensityProjections (class in pytrip.paths) destroy() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) discover_file() (pytrip.cube.Cube static method) DosCube (class in pytrip) (class in pytrip.dos) DoseCube (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.dosecube)

E

evaluator() (in module pytrip.util) execute() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) execute_mult_proj() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

execute_simple() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) export() (pytrip.utils.gd2dat.ReadGd method)

F

Field (class in pytrip.field) (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.field) FieldCollection (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.fieldcollection) FileIsRead (pytrip.utils.rst_read.RstfileRead attribute)

fillData() (pytrip.utils.rst_read.SubMachine method) finish() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

G

generate_random_error_machine() (pytrip.raster.SubMachine method) generate_random_error_rst() (pytrip.raster.Rst method) (pytrip.Rst method) get_2d_projection_on_basis() (pytrip.vdx.Voi method) (pytrip.Voi method) get_2d_slice() (pytrip.vdx.Voi method) (pytrip.Voi method) get_3d_polygon() (pytrip.vdx.Voi method) (pytrip.Voi method) get_active_plan() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) get_all_dose_percent() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_area_contour() (in module pytrip.res.point) get_basis_from_angles() (in module pytrip.res.point) get_bio_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_class_name() (in module pytrip.util) get_color() (pytrip.tripexecuter.Voi method) (pytrip.Voi method) (pytrip.tripexecuter.voi.Voi method) (pytrip.vdx.Voi method) get_contourextension() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_couch() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_cube_basis() (pytrip.field.Field method) get_cube_value() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_ddd_by_energy() (pytrip.ddd.DDD method) get_ddd_data() (pytrip.ddd.DDD method) get_ddd_folder() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_ddd_grid() (pytrip.ddd.DDD method) get_ddd_list() (pytrip.field.Field method) get_dedx_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_dist() (pytrip.ddd.DDD method) get_dose() (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.dosecube.DoseCube method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_dose_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_dose_cube() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_dose_percent() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_dosecube() (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.dosecube.DoseCube method) get_doseextension() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_dvh() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_energy_list() (pytrip.field.Field method) get_eps() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_field_by_id() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) get_field_by_name() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) get_field_datasource() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_fields() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) get_fwhm() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_gantry() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_geps() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_hlut_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_hu_offset() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_hu_value() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_intersections() (pytrip.vdx.Slice method) get_iterations() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_lateral() (pytrip.field.SubField method) get_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_let_cube() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_lvh() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_max() (in module pytrip.res.utils) (pytrip.LETCube method) (pytrip.let.LETCube method) get_max_dist() (pytrip.field.Field method) (pytrip.field.SubField method) get_max_dose_fraction() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_merge_raster_points() (pytrip.field.SubField method) get_merged_raster_points() (pytrip.field.Field method) get_min() (in module pytrip.res.utils) get_min_max() (pytrip.raster.Rst method) (pytrip.Rst method) (pytrip.Voi method) (pytrip.vdx.Contour method) (pytrip.vdx.Slice method) (pytrip.vdx.Voi method) get_modified_images() (pytrip.ctimage.CTImages method) (pytrip.CTImages method) get_name() (pytrip.tripexecuter.Field method) (pytrip.Voi method) (pytrip.tripexecuter.RBE method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.Voi method) (pytrip.tripexecuter.field.Field method) (pytrip.tripexecuter.rbehandler.RBE method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) (pytrip.tripexecuter.voi.Voi method) (pytrip.vdx.Voi method) get_nearest_point() (in module pytrip.res.point) get_number_of_fields() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.fieldcollection.FieldCollection method)

get_opt_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_opt_method() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_opt_princip() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_optimize() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_out_bio_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_out_dose_mean_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_out_field() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_out_mean_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_out_phys_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_password() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_path() (pytrip.tripexecuter.RBE method) (pytrip.tripexecuter.rbehandler.RBE method) get_plan() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) get_plan_by_id() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) get_plans() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) get_position() (pytrip.vdx.Slice method) get_projectile() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.field.Field method) (pytrip.tripexecuter.tripplan.TripPlan method) get_raster_grid() (pytrip.raster.SubMachine method) get_raster_matrixs() (pytrip.field.SubField method) get_raster_min_max() (pytrip.raster.SubMachine method) get_raster_points() (pytrip.raster.SubMachine method) get_rasterfile() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_rasterstep() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_rbe_by_name() (pytrip.tripexecuter.RBEHandler method) (pytrip.tripexecuter.rbehandler.RBEHandler method) get_rbe_list() (pytrip.tripexecuter.RBEHandler method) (pytrip.tripexecuter.rbehandler.RBEHandler method) get_res_tissue_type() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_roi_type_name() (pytrip.vdx.Voi method) (pytrip.Voi method) get_roi_type_number() (pytrip.vdx.Voi method) (pytrip.Voi method) get_row_intersections() (pytrip.vdx.Voi method) (pytrip.Voi method) get_server() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_sis_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_size() (pytrip.field.SubField method) get_slice_at_pos() (pytrip.vdx.Voi method) (pytrip.Voi method) get_spc_folder() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_stepsize() (pytrip.raster.Rst method) (pytrip.Rst method) get_subfield_cube() (pytrip.field.SubField method) get_submachines() (pytrip.raster.Rst method) (pytrip.Rst method) get_target() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) get_target_dose_cube() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_target_name() (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.voicollection.VoiCollection method) get_target_tissue_type() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_thickness() (pytrip.vdx.Voi method) (pytrip.Voi method) get_transport() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) get_type() (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.dosecube.DoseCube method) get_username() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_value_at_indice() (pytrip.cube.Cube method) get_value_at_pos() (pytrip.cube.Cube method) get_voi() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) get_voi_by_name() (pytrip.tripexecuter.VoiCollection method) (pytrip.VdxCube method) (pytrip.tripexecuter.voicollection.VoiCollection method) (pytrip.vdx.VdxCube method) get_voi_cube() (pytrip.vdx.Voi method) (pytrip.Voi method) get_voi_data() (pytrip.tripexecuter.Voi method) (pytrip.tripexecuter.voi.Voi method) get_voi_datasource() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_voi_names() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method) get_vois() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.voicollection.VoiCollection method) get_voxelplan() (pytrip.ctimage.CTImages method) (pytrip.CTImages method) get_window() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_working_dir() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) get_x_intersection() (in module pytrip.res.point) get_zsteps() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method)

H

has_childs() (pytrip.vdx.Contour method)

I

import_hlut() (pytrip.DensityCube method) (pytrip.paths.DensityCube method) import_vdx() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method) indices_to_pos() (pytrip.cube.Cube method) ini_execute() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) Init() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.voicollection.VoiCollection method) InputError

is_compatible() (pytrip.cube.Cube method) is_oar() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) is_plan_selected() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) is_remote() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) is_selected() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.Voi method) (pytrip.tripexecuter.field.Field method) (pytrip.tripexecuter.tripvoi.TripVoi method) (pytrip.tripexecuter.voi.Voi method) is_target() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method)

L

LETCube (class in pytrip) (class in pytrip.let) load_ct_cube() (in module pytrip.utils.cubeslice) load_data_cube() (in module pytrip.utils.cubeslice) load_ddd() (pytrip.ddd.DDD method) load_dicom() (pytrip.raster.Rst method) (pytrip.Rst method) load_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) load_field() (pytrip.raster.Rst method) (pytrip.Rst method)

load_from_raster_points() (pytrip.field.Field method) load_from_structure() (pytrip.cube.Cube method) load_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) load_rbe() (pytrip.tripexecuter.RBEHandler method) (pytrip.tripexecuter.rbehandler.RBEHandler method) load_rbe_folder() (pytrip.tripexecuter.RBEHandler method) (pytrip.tripexecuter.rbehandler.RBEHandler method) log() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

M

main() (in module pytrip.utils.bevlet2oer) (in module pytrip.utils.cubeslice) (in module pytrip.utils.dicom2trip) (in module pytrip.utils.gd2agr) (in module pytrip.utils.gd2dat) (in module pytrip.utils.rst2sobp) (in module pytrip.utils.rst_plot) (in module pytrip.utils.trip2dicom) max_list() (in module pytrip.res.point) merge() (pytrip.cube.Cube method) merge_zero() (pytrip.cube.Cube method)

min_list() (in module pytrip.res.point) ModuleNotLoadedError move_voi() (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.voicollection.VoiCollection method)

N

next() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.VoiCollection method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) (pytrip.tripexecuter.voicollection.VoiCollection method) number_of_contours() (pytrip.vdx.Slice method) number_of_points() (pytrip.vdx.Contour method)

number_of_slices() (pytrip.vdx.Voi method) (pytrip.Voi method) number_of_vois() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method)

O

optimize_angle() (pytrip.paths.DensityProjections method)

override_cube_values() (pytrip.cube.Cube method)

P

parse_path() (pytrip.cube.Cube class method) parse_to_var() (in module pytrip.file_parser) point_in_polygon() (in module pytrip.res.point) pos_to_indices() (pytrip.cube.Cube method) post_process() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) prepare_folder() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) print_child() (pytrip.vdx.Contour method) push() (pytrip.vdx.Contour method) pytrip (module) pytrip.ctimage (module) pytrip.ctx (module) pytrip.cube (module) pytrip.ddd (module) pytrip.dicomhelper (module) pytrip.dos (module) pytrip.error (module) pytrip.field (module) pytrip.file_parser (module) pytrip.let (module) pytrip.paths (module) pytrip.raster (module) pytrip.res (module) pytrip.res.point (module) pytrip.res.utils (module) pytrip.tripexecuter (module)

pytrip.tripexecuter.dosecube (module) pytrip.tripexecuter.field (module) pytrip.tripexecuter.fieldcollection (module) pytrip.tripexecuter.pytripobj (module) pytrip.tripexecuter.rbehandler (module) pytrip.tripexecuter.tripexecuter (module) pytrip.tripexecuter.tripplan (module) pytrip.tripexecuter.tripplancollection (module) pytrip.tripexecuter.tripvoi (module) pytrip.tripexecuter.voi (module) pytrip.tripexecuter.voicollection (module) pytrip.util (module) pytrip.utils (module) pytrip.utils.bevlet2oer (module) pytrip.utils.cubeslice (module) pytrip.utils.dicom2trip (module) pytrip.utils.gd2agr (module) pytrip.utils.gd2dat (module) pytrip.utils.rst2sobp (module) pytrip.utils.rst_plot (module) pytrip.utils.rst_read (module) pytrip.utils.trip2dicom (module) pytrip.vdx (module) pytripObj (class in pytrip.tripexecuter.pytripobj)

R

RBE (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.rbehandler) RBEHandler (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.rbehandler) read() (pytrip.cube.Cube method) (pytrip.VdxCube method) (pytrip.utils.gd2dat.ReadGd method) (pytrip.vdx.VdxCube method) read_dicom() (pytrip.ctx.CtxCube method) (pytrip.CtxCube method) (pytrip.DosCube method) (pytrip.VdxCube method) (pytrip.Voi method) (pytrip.dos.DosCube method) (pytrip.vdx.VdxCube method) (pytrip.vdx.Voi method) read_dicom_folder() (in module pytrip.dicomhelper) read_dicom_header() (pytrip.cube.Cube method) read_trip_data_file() (pytrip.cube.Cube method) read_trip_header() (pytrip.cube.Cube method) read_trip_header_file() (pytrip.cube.Cube method) read_vdx() (pytrip.vdx.Contour method) (pytrip.VdxCube method) (pytrip.Voi method) (pytrip.vdx.Slice method) (pytrip.vdx.VdxCube method) (pytrip.vdx.Voi method) read_vdx_old() (pytrip.vdx.Contour method) (pytrip.Voi method) (pytrip.vdx.Slice method) (pytrip.vdx.Voi method) ReadGd (class in pytrip.utils.bevlet2oer) (class in pytrip.utils.gd2dat)

remove_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) remove_dose_by_type() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) remove_dose_percent() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) remove_field() (pytrip.tripexecuter.FieldCollection method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.fieldcollection.FieldCollection method) (pytrip.tripexecuter.tripplan.TripPlan method) remove_inner_contours() (pytrip.vdx.Contour method) (pytrip.vdx.Slice method) remove_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) Rst (class in pytrip) (class in pytrip.raster) RstfileRead (class in pytrip.utils.rst_read) run_ssh_command() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) run_trip() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) run_trip_local() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) run_trip_remote() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

S

sagital (pytrip.vdx.Voi attribute) (pytrip.Voi attribute) sagittal (pytrip.vdx.Voi attribute) (pytrip.Voi attribute) SamfileRead (class in pytrip.utils.rst_read) save() (pytrip.tripexecuter.pytripobj.pytripObj method) save_data() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripplan.TripPlan method) save_exec() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripplan.TripPlan method) save_plan() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) save_random_error_machine() (pytrip.raster.SubMachine method) save_random_error_rst() (pytrip.raster.Rst method) (pytrip.Rst method) set_active_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_active_plan() (pytrip.tripexecuter.TripPlanCollection method) (pytrip.tripexecuter.tripplancollection.TripPlanCollection method) set_bio_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_byteorder() (pytrip.cube.Cube method) set_color() (pytrip.vdx.Voi method) (pytrip.Voi method) set_contourextension() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_couch() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_cube_value() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_data_type() (pytrip.cube.Cube method) set_ddd_folder() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_dedx_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_dose() (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.dosecube.DoseCube method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_dose_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_dose_percent() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripplan.TripPlan method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_doseextension() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_eps() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_fwhm() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_gantry() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_geps() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_hlut_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_hu_offset() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_hu_value() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_iterations() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_max_dose_fraction() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) set_name() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.field.Field method) (pytrip.tripexecuter.tripplan.TripPlan method) set_offset_cube_values() (pytrip.cube.Cube method) set_opt_algorithm() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method)

set_opt_method() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_opt_princip() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_optimize() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_out_bio_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_out_dose_mean_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_out_field() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_out_mean_let() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_out_phys_dose() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_password() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_phys_bio() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_plan() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) set_projectile() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_rasterfile() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_rasterstep() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_remote_state() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_res_tissue_type() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_server() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_sis_file() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_spc_folder() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_target() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) set_target_dose_cube() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_target_tissue_type() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_type() (pytrip.tripexecuter.DoseCube method) (pytrip.tripexecuter.dosecube.DoseCube method) set_username() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_window() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_working_dir() (pytrip.tripexecuter.TripPlan method) (pytrip.tripexecuter.tripplan.TripPlan method) set_z_table() (pytrip.cube.Cube method) set_zsteps() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.field.Field method) short_distance_polygon_idx() (in module pytrip.res.point) showVersion() (pytrip.utils.rst_read.RstfileRead method) Slice (class in pytrip.vdx) slice_to_z() (pytrip.cube.Cube method) split_fields() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) split_plan() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method) SubField (class in pytrip.field) SubMachine (class in pytrip.raster) (class in pytrip.utils.rst_read)

T

to_voxel_string() (pytrip.vdx.Contour method) (pytrip.Voi method) (pytrip.vdx.Slice method) (pytrip.vdx.Voi method) toogle_oar() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) toogle_plan_selected() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method) toogle_selected() (pytrip.tripexecuter.Field method) (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.Voi method) (pytrip.tripexecuter.field.Field method) (pytrip.tripexecuter.tripvoi.TripVoi method) (pytrip.tripexecuter.voi.Voi method) toogle_target() (pytrip.tripexecuter.TripVoi method) (pytrip.tripexecuter.tripvoi.TripVoi method)

TripExecuter (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.tripexecuter) TripPlan (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.tripplan) TripPlanCollection (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.tripplancollection) TripVoi (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.tripvoi)

V

VdxCube (class in pytrip) (class in pytrip.vdx) vector_to_angles() (in module pytrip.res.point) visualize_data() (pytrip.tripexecuter.TripExecuter method) (pytrip.tripexecuter.tripexecuter.TripExecuter method)

Voi (class in pytrip) (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.voi) (class in pytrip.vdx) VoiCollection (class in pytrip.tripexecuter) (class in pytrip.tripexecuter.voicollection)

W

write() (pytrip.ctx.CtxCube method) (pytrip.CtxCube method) (pytrip.DosCube method) (pytrip.LETCube method) (pytrip.VdxCube method) (pytrip.dos.DosCube method) (pytrip.let.LETCube method) (pytrip.vdx.VdxCube method) write_dicom() (pytrip.ctx.CtxCube method) (pytrip.CtxCube method) (pytrip.DosCube method) (pytrip.VdxCube method) (pytrip.dos.DosCube method) (pytrip.vdx.VdxCube method) write_dvh() (pytrip.dos.DosCube method) (pytrip.DosCube method) write_lvh_to_file() (pytrip.let.LETCube method) (pytrip.LETCube method)

write_to_trip() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method) write_to_voxel() (pytrip.vdx.VdxCube method) (pytrip.VdxCube method) write_trip_data() (pytrip.cube.Cube method) write_trip_header() (pytrip.cube.Cube method)